Mis-alignment of the miter slots to the blade.
As regards the squareness of a miter gauge held workpiece cut with either a warped blade, a wobble blade or a mis-aligned table. End result will be as square as the miter gauge. The path of the cut will determined by the motion of the miter gauge as it feeds the workpiece into(and away from the back of) the blade. The differences introduced by the three conditions above are wider kerf, wider wide kerf, and a wide kerf respectively. The extra wideness is caused by the blade rotation not being parallel to the motion of the workpiece in all three instances.
Rip Fence alignment.
We have a catch 22 in that we can mount the fence on either side of the blade, so intentional skewing the fence(to preclude narrower rear space) will only work on one side(causes the narrowness when on the other side). This assumes the fence aligns to the table parallel to the slots and blade.
Table front deviations.
Since the rip fence references the table front, the alignment of the fence may vary if the front is not straight. I have 'discovered' that the extrusion on the front of a M5(later Goldie) or MV 500 can be 'warped/bent'(not straight). It is secured to the table front with three screws/lockwashers. Although there is a ledge the extrusion can 'self' align to, any local deviation from straight can(and will) cause the fence alignment to the slots to vary. FWIW it may be possible to bias the fence in opposite directions on opposite sides(I have not done so, but have biased one side to 'match' the other).
Conjecture: Shimming(very slightly) a 510 or 520 front rail may also be possible to allow
slight extra blade clearance on both sides of the blade. Those twins from the north woods of Wisconsin recommend 0.02 at the rear!!!
Ripped edge squareness.
The ripped edge squareness is determined by the trunion stop/setting, and is independent from the blade slot alignment.
Spot on positioning of everything else.
Ain't no such thing. Just different degrees of missing. Anything that is movable has inherent slop. All those things I mentioned above are movable and then 'lockable'. If not locked any alignment adjustments will be altered when later locked. Therefore all those locks must be secure. Now with them all locked, the resulting position of things will be somewhat deviant from 'perfect'.
Other consideration(s).
Need I say that locking everything includes legs firmly on the floor. Repositioning to another area MAY alter alignment, but IMHO the legs are slightly compliant so as to minimize that, but they are limited in range.
An SPT may alter the setting of the legs on the floor(heavy jointer especially).
Realize this equipment is not rigidly secured to the Hoover Dam and will be variant.
All this is why I think a deviant jig is impractical.
Accuracy is determined by the power of one's magnifying glass!
Good enough is a matter of practically.
Not to be overlooked is the tie bar clamp.